- Berrendero, E., Perona, E. Y Mateo, P (2008). Genetic and morphological characterization of Rivularia and Calothrix (Nostocales Cyanobacteria)mfrom running waters. International Journal Systematic Evolution Microbiology 58, 447-460

- Rodríguez, V., Aguirre de Carcer, D. Loza V., Perona, E. Y Mateo, P (2007). A molecular fingerprint technique to detect Pollution-related changes in river cyanobacterial diversity. J. Environ Qual. 36: 464- 468

- Perona E. y Mateo, P. (2006). Benthic cyanobactria assemblages as indicators of nutrient enrichment regimes in a Spanish river. Acta Hydrochim. hydrobiol: 24: 67-72 (A)

- Mateo, P., Douterelo, I., Berrendero, E. y Perona, E., (2006). Physiological differences between two species of cyanobacteria in relation to phosphorus limitation. Journal Phycology, 42: 61-66 (A)

- Serrano, A., Mateo, P. y Perona, E. (2004) Estructura y composición de la comunidad de cianobacterias bentónicas de un arroyo de montaña mediterráneo, el arroyo Mediano (Madrid) Limnética 23(1-2): 85-95 (A)

- Douterelo I., Perona, E. y Mateo P. (2004) Use of cyanobacteria to assess water quality in running water. Environmental Pollution 127 :377-384 (A)

- Perona, E. (2003) 5 th International symposium “Use of Algae for monitoring rivers” Algas 30: 19-20 (A)

- Perona, E .; Bonilla, I., Aboal, M. y Mateo, P. (2003) Cyanobacterial diversity in a Spanish river determined by means of isolation of cultures. Morphological variability of isolates in relation to natural populations. Archiv für Hydrobiology Suppl. 148 = Algological Studies 109: 475-486 (A)

- M.Aboal, M. A.uig, P. Mateo y E. Perona, (2002). Implications of cyanophyte toxicity on biological monitoring of calcareous streams in north-east Spain Journal of Applied Phycology 14: 49-56 (A)

- Leal, M.;Quintero, L; Mora, R.; Ruiz, G. Perona, E. y Morales, E. (2001) C aracterización de la cianobacteria Pseudanabaena galeata a diferentes condiciones de cultivo, aislada de la represa de Tulé , Estado Zulia, Venezuela. Boletín del centro de Investigaciones Biológicas 35 No. 3 : 223-241 (A)

- Perona, E ; Bonilla, I. y Mateo P (1999) Spatial and temporal changes in water quality in a Mediterranean River. The Science of Total Environment 241: 75-90 ( A)

- Perona, E .; Bonilla, I. y Mateo, P. (1999). Use of Benthic Cyanobacteria to monitor water quality in a Spanish river En: Use of algae for monitoring rivers III. pp: 216-223 B.A. Whitton, J. Prygiel y J. Bukowska (eds) ISBN 2-9502083-5-5 (CL)

- Perona, E ; Bonilla, I. y Mateo P. (1998) Epilithic cyanobacterial communities and water quality: an alternative tool for monitoring eutrophication in the Alberche River ( Spain). Journal of Applied Phycology 10: 183-191. (A)

- Perona, E. (1997) Cianobacterias epilíticas y calidad del agua del río ALberche a su paso por la Comunidad de Madrid Alquibla 26: 17-18 ( A)

- Perona, E . (1996) Cianobacterias epilíticas y calidad del agua del río Alberche a su paso por la Comunidad de Madrid. Tesis Doctoral en microfichas 351 Pág. Ed. Universidad Autónoma de Madrid. ISBN: 84-7477-609-0 (L)

- Marco, E.; Perona, E. y Orús, M.I. (1992) Effects of Acephate on N 2‑fixing cyanobacterium Anabaena PCC 7119. Bulletin of Environmental Contamination and Toxicology 48: 894-900. ( A)

- Perona, E ., Marco, E. y Orús, M.I. (1991) Effects of Dimethoate on N 2-fixing cyanobacterium Anabaena PCC 7119. Bulletin of Environmental Contamination and Toxicology 47: 758‑763. (A)

- Perona, E ., Marco, E. y Orús, M.I. (1991) Alteration of dinitrogen fixation and metabolism by organophosphorus insecticide phosphamidon in N 2 fixing cyanobacterium Anabaena PCC 7119. Environmental and Experimental Botany ­31: 479‑488. (A)

- Perona, E ., Marco, E. y Orús, M.I. (1991) Effect of organophosphorus insecticides Acephate and Dimethoate on N 2 fixing Cyanobacterium Anabaena PCC 7119. En: II Work‑shop pesticides‑soils. pp 151-156 Juan Navarro (ed) ISBN 84-604-0399-8 (CL)

- Perez, A.; Perona, E. y Valero, A (1989) El lagunaje En: Residuos Urbanos Y Medio Ambiente. Cap.5 pp 57-64 Ed. Universidad Autónoma de Madrid ISBN 84-7477-194-3 (CL)